Seok Joo Chae (채석주)

Postdoctoral Associate in Igoshin Research group at Rice Univeristy

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seokjoo[at]rice[dot]edu

Dept. of Bioengineering

Rice University

I am a postdoctoral associate in the Department of Bioengineering at Rice University. My postdoc mentor is Oleg Igoshin.

I received Ph.D. from Department of Mathematical Sciences at KAIST, where I conducted my research under the mentorship of Jae Kyoung Kim.

My research interests lie in analyzing biological systems using mathematical tools, with a focus on spatiotemporal dynamics, AI-driven data analysis, circadian rhythms, immunotherapy modeling, and single-cell RNA sequencing.

Although I am a mathematician by training, I have extensive experience collaborating with experimental biologists and doctors.

selected publications

  1. iscience_abstract.jpg
    Spatially coordinated collective phosphorylation filters spatiotemporal noises for precise circadian timekeeping
    Seok Joo Chae+, Dae Wook Kim, Seunggyu Lee, and 1 more author
    iScience, 2023
  2. diffusion.png
    Beyond microtubules: The cellular environment at the endoplasmic reticulum attracts proteins to the nucleus, enabling nuclear transport
    Seok Joo Chae+, Dae Wook Kim, Oleg A. Igoshin, and 2 more authors
    iScience, 2024
  3. scLENS.png
    scLENS: data-driven signal detection for unbiased scRNA-seq data analysis
    Hyun Kim, Won Chang, Seok Joo Chae, and 3 more authors
    Nature Communications, 2024
  4. pdeqssa.png
    Beyond homogeneity: Assessing the validity of the Michaelis–Menten rate law in spatially heterogeneous environments
    Seolah Shin+, Seok Joo Chae+, Seunggyu Lee*, and 1 more author
    PLOS Computational Biology, 2024
  5. spde.png
    From Homogeneity to Heterogeneity: Refining Stochastic Simulations of Gene Regulation
    Seok Joo Chae, Seolah Shin, Kangmin Lee, and 2 more authors
    Computational and Structural Biotechnology Journal, 2025